Paired-like homeodomain transcription factor 2
PITX2genePITX2 genetic variants increase atrial-fibrillation and thrombotic-stroke risk, raising cardioembolic but not atherothrombotic MI susceptibility.
Pathway placement
Cascade stepOff-pathway / systemic markers
Confidencelow
RationaleAF/stroke genetic variant; mechanism in Type 1 MI not direct.
Druggability
Not assessed (no mapped human gene target).
Assay & specimen
Class-level default (no specific cleared assay)— generic method inferred from analyte class; confirm against a specific product insert before use.
Specimen
Whole blood — gene is not a circulating analyte; measure protein product or genotype
Collection tube
K2-EDTA whole blood (lavender-top)
Method / principle
SNP genotyping / sequencing; or immunoassay of encoded protein
Reagent / substrate
Allele-specific primers/probes (TaqMan) or NGS panel; or antibody for protein
Platform
qPCR / NGS / array
Turnaround · availability
Send-out · Genotyping widely available; protein assay variable
Literature evidence(1)
- Commentary on a GWAS: HDAC9 and the risk for ischaemic stroke.BMC medicine · 2012 · PMID 22776031 · doi