PU.1
SPI1genePU.1 controls myeloid and macrophage differentiation programs central to atherosclerotic inflammation and lipid handling.
Pathway placement
Cascade stepPlaque inflammation
Confidencemedium
RationaleMaster transcription factor for myeloid lineage; regulates macrophage-derived LIPA lipase driving plaque inflammation.
Also acts inLipid entry/oxidation
Druggability
DruggableYes
Known drugs / candidates0
Small-molecule tractableYes
Antibody tractableNo
EnsemblENSG00000066336
Type I vs Type II discrimination
ScoresLow-confidence (proxy)
R — rupture / Type-I33
C — confounder / Type-II69
A — assay feasibility52
E — evidence strength26
T1DI (composite)4
Specificity differential (R−C)-36.1
Confounder panel (Type-II drivers)
No confounder evidence retrieved.
Tier: light (literature co-occurrence proxy — lower confidence). See the discrimination table for all markers.
Assay & specimen
Class-level default (no specific cleared assay)— generic method inferred from analyte class; confirm against a specific product insert before use.
Specimen
Whole blood — gene is not a circulating analyte; measure protein product or genotype
Collection tube
K2-EDTA whole blood (lavender-top)
Method / principle
SNP genotyping / sequencing; or immunoassay of encoded protein
Reagent / substrate
Allele-specific primers/probes (TaqMan) or NGS panel; or antibody for protein
Platform
qPCR / NGS / array
Turnaround · availability
Send-out · Genotyping widely available; protein assay variable
Literature evidence(1)
- LIPA, a risk locus for coronary artery disease: decoding the variant-to-function relationship.European heart journal · 2025 · PMID 40827730 · doi