FOXP3
FOXP3geneFOXP3 hypermethylation impairs regulatory T cell function, promoting plaque inflammation and atherothrombotic progression.
Pathway placement
Cascade stepPlaque inflammation
Confidencemedium
RationaleHypermethylation in CHD; FOXP3 regulates regulatory T cell differentiation and plaque inflammation.
Druggability
DruggableNo
Known drugs / candidates0
Small-molecule tractableNo
Antibody tractableNo
EnsemblENSG00000049768
Type I vs Type II discrimination
ScoresIndeterminate
R — rupture / Type-I67
C — confounder / Type-II47
A — assay feasibility52
E — evidence strength86
T1DI (composite)27
Specificity differential (R−C)+20
Confounder panel (Type-II drivers)
1sepsis / systemic inflammationmag 2
2anemia / acute blood lossn/a
3hypovolemia / dehydrationmag 0
4tachyarrhythmiamag 2
5hypoxemia / respiratory failuremag 1
6hypertensive emergencyn/a
7high-demand / peri-operative stressmag 2
Coverage: 5/7 confounders with evidence
Tier: deep-scored (abstract-extracted) · 14 supporting references. See the discrimination table for all markers.
Assay & specimen
Class-level default (no specific cleared assay)— generic method inferred from analyte class; confirm against a specific product insert before use.
Specimen
Whole blood — gene is not a circulating analyte; measure protein product or genotype
Collection tube
K2-EDTA whole blood (lavender-top)
Method / principle
SNP genotyping / sequencing; or immunoassay of encoded protein
Reagent / substrate
Allele-specific primers/probes (TaqMan) or NGS panel; or antibody for protein
Platform
qPCR / NGS / array
Turnaround · availability
Send-out · Genotyping widely available; protein assay variable
Literature evidence(1)
- Association between DNA methylation and coronary heart disease or other atherosclerotic events: A systematic review.Atherosclerosis · 2017 · PMID 28577936 · doi