Zinc finger homeobox 3
ZFHX3geneZFHX3 genetic variants modulate DNA methylation and AF/stroke risk; possible indirect atherosclerotic-inflammation pathway.
Pathway placement
Cascade stepOff-pathway / systemic markers
Confidencelow
RationaleAF/stroke variant; DNA methylation in MI; mechanism unclear.
Also acts inVascular inflammation
Druggability
Not assessed (no mapped human gene target).
Assay & specimen
Class-level default (no specific cleared assay)— generic method inferred from analyte class; confirm against a specific product insert before use.
Specimen
Whole blood — gene is not a circulating analyte; measure protein product or genotype
Collection tube
K2-EDTA whole blood (lavender-top)
Method / principle
SNP genotyping / sequencing; or immunoassay of encoded protein
Reagent / substrate
Allele-specific primers/probes (TaqMan) or NGS panel; or antibody for protein
Platform
qPCR / NGS / array
Turnaround · availability
Send-out · Genotyping widely available; protein assay variable
Literature evidence(2)
- Epigenome-wide association of myocardial infarction with DNA methylation sites at loci related to cardiovascular disease.Clinical epigenetics · 2017 · PMID 28515798 · doi
- Commentary on a GWAS: HDAC9 and the risk for ischaemic stroke.BMC medicine · 2012 · PMID 22776031 · doi